Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904444.1_cds_XP_016454603.1_48613
CDS Infomation

[gene=LOC107778807] [db_xref=GeneID:107778807] [protein=transcription factor HBP-1b(c38)-like] [protein_id=XP_016454603.1] [location=join(155418..155515,155834..155937,156066..156148,156479..156724,157594..157671,157781..157840,158446..158523,158613..158670,158764..159035,159117..159362,159460..159612)] [gbkey=CDS]
Sequence

ATGCAAGCTTTCAAAGCAGCAGTACTACCAGCTGTTACTCTTAACAATAATAATAACAAC
AATTCTAATATGTATTGCCACTCATCTTTTTACCTCAGAGGAGATGAAGCTAGTAGACAT
GCAGCAGCACGTTTTGCTGATATTGGAGAACTTGAACAGTCTACAGGATTTCCTCAAGAA
GATGCTATTAGTTTAAGCAGAAGTTCTTTATATGGTGAGATGAGGCCAAACAATGTTGGT
GTAGTTTCTTCAAATAATAACTTGCATTTTGGTGAACTTAATACGAGTATAGGGTCAACA
GAGATGGGGTCATCAGAAACAGGAGGGGTGGAAGCAGGGGGGAGGTTTATGTTGCACAAG
GCACAAACAGCAATGGTGGGTGGTGGTGGTGTAGTAGGCGGCGGCGGCGGTGCGGTGACT
TTGGGAAATGGCCATTTTGAGAATTGGGCAGATTCTGGTATTGCAGACAATAGCCATAGC
CAGCAGACTGACACTTCCACAGATGTTGATACTGATGAAAGAAACCACCAGGGCCAAGGG
GTTCAACATGGTGCATTAATGACTGTGGACTCCATCGATCAGTCCAAAGTAAAGCATGGA
GATCAGAAGACACTGCGCAGGCTGGCTCAAAATCGAGAAGCTGCTAGGAAAAGTCGATTG
AGGAAAAAAGCATATGTTCAACAGCTGGAGACTAGTAGGCTCAAACTATCACAGTTAGAG
CAGGAGCTAAAACGAGCCCGCCAACAGGGCATATTTATTGCTAATGGATATGCGGGGGAT
CAGAGTCTTTCTGCCGGCGGAAATGGGGCATTGGCATTTGACATAGATTATGCACGTTGG
TTAGAAGACCATCAACGACTTATCAGTGATCTCCGATCAGCTGTAAATTCGCACAGGGGA
GATAATGAACTGCGCCTTCTTGTTGATGGAGTAATGTTACATTATGACGATAAATTCAAG
TTAAAGAGTGTAGGAGCAAAATCAGATGTTTTTCATATGCTGTCGGGCATGTGGAAGACT
CCTGCGGAAAGGTGTTTCATGTGGTTGGGTGGATTTCGTTCTTCCGAGCTTCTCAAGATT
CTTGGAAACCACCTTGAACCATTGACAGAGCAGCAGCTCATGGGCATATGTAATTTGCAG
CAGTCTTCTCAGCAGGCTGAGGATGCCCTATCGCAAGGCATGGAAGCCCTGCAACAATCT
CTTGTCGATACACTTTCATCGGCGTCTCTTGGCCCTACTGGCTCCGGAAACGTAGCCGAC
TATATGGGGCAAATGGCAATCGCAATGGGCAAGCTTGCCACCCTTGAGAACTTCCTTTAT
CAGGCTGATCTTCTGAGACAACAAACTTTGCAACAATTGCATCGAATCTTGACCACACGT
CAAGCTGCTCGAGCCCTGCTTGTTATAAGTGATTACATGTCAAGGCTTCGGGCACTCAGT
TCGTTGTGGTTAGCACGCCCCAAAGACCAACTCTAG

Peptide Sequence

PEP ID

XP_016454603.1
PEP Infomation

PREDICTED: transcription factor HBP-1b(c38)-like [Nicotiana tabacum]
Sequence

MQAFKAAVLPAVTLNNNNNNNSNMYCHSSFYLRGDEASRHAAARFADIGELEQSTGFPQE
DAISLSRSSLYGEMRPNNVGVVSSNNNLHFGELNTSIGSTEMGSSETGGVEAGGRFMLHK
AQTAMVGGGGVVGGGGGAVTLGNGHFENWADSGIADNSHSQQTDTSTDVDTDERNHQGQG
VQHGALMTVDSIDQSKVKHGDQKTLRRLAQNREAARKSRLRKKAYVQQLETSRLKLSQLE
QELKRARQQGIFIANGYAGDQSLSAGGNGALAFDIDYARWLEDHQRLISDLRSAVNSHRG
DNELRLLVDGVMLHYDDKFKLKSVGAKSDVFHMLSGMWKTPAERCFMWLGGFRSSELLKI
LGNHLEPLTEQQLMGICNLQQSSQQAEDALSQGMEALQQSLVDTLSSASLGPTGSGNVAD
YMGQMAIAMGKLATLENFLYQADLLRQQTLQQLHRILTTRQAARALLVISDYMSRLRALS
SLWLARPKDQL

Transcript Sequence

Gene sequence data has not been registered.